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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.5

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2024-05-25, 07:25 based on data in: /mnt/Citosina/amedina/backup/lupus/SLE_RNA_seq/quality1


        General Statistics

        Showing 376/376 rows and 3/5 columns.
        Sample Name% Dups% GCM Seqs
        QR001_0_1
        66.4%
        52%
        33.3
        QR001_0_2
        63.7%
        52%
        33.3
        QR001_1_1
        86.9%
        52%
        32.3
        QR001_1_2
        83.4%
        52%
        32.3
        QR001_2_1
        69.4%
        52%
        31.1
        QR001_2_2
        54.1%
        52%
        31.1
        QR001_4_1
        79.8%
        52%
        36.7
        QR001_4_2
        63.3%
        52%
        36.7
        QR005_0_1
        68.3%
        52%
        50.5
        QR005_0_2
        53.7%
        52%
        50.5
        QR005_1_1
        63.9%
        53%
        36.7
        QR005_1_2
        49.5%
        53%
        36.7
        QR005_2_1
        66.1%
        53%
        36.5
        QR005_2_2
        51.9%
        53%
        36.5
        QR005_3_1
        74.8%
        53%
        42.0
        QR005_3_2
        71.0%
        53%
        42.0
        QR009_0_1
        75.3%
        52%
        48.9
        QR009_0_2
        71.9%
        52%
        48.9
        QR009_2_1
        60.3%
        52%
        36.9
        QR009_2_2
        48.6%
        52%
        36.9
        QR009_3_1
        74.0%
        53%
        51.1
        QR009_3_2
        70.1%
        53%
        51.1
        QR009_4_1
        72.2%
        53%
        46.3
        QR009_4_2
        71.3%
        53%
        46.3
        QR011_0_1
        68.3%
        51%
        34.6
        QR011_0_2
        65.6%
        51%
        34.6
        QR011_1_1
        61.5%
        51%
        32.6
        QR011_1_2
        60.4%
        51%
        32.6
        QR011_2_1
        73.1%
        49%
        37.4
        QR011_2_2
        71.4%
        49%
        37.4
        QR011_3_1
        87.0%
        50%
        40.5
        QR011_3_2
        85.2%
        50%
        40.5
        QR011_4_1
        62.5%
        51%
        30.7
        QR011_4_2
        60.9%
        51%
        30.7
        QR012_1_1
        62.4%
        51%
        38.8
        QR012_1_2
        60.3%
        51%
        38.8
        QR012_2_1
        60.5%
        51%
        32.1
        QR012_2_2
        59.7%
        51%
        32.1
        QR012_3_1
        69.0%
        50%
        49.8
        QR012_3_2
        67.7%
        50%
        49.8
        QR012_4_1
        63.9%
        52%
        33.6
        QR012_4_2
        62.8%
        51%
        33.6
        QR013_0_1
        53.9%
        51%
        32.5
        QR013_0_2
        53.1%
        51%
        32.5
        QR013_1_1
        63.3%
        52%
        35.0
        QR013_1_2
        62.5%
        52%
        35.0
        QR013_2_1
        59.9%
        51%
        40.4
        QR013_2_2
        58.6%
        51%
        40.4
        QR013_3_1
        84.9%
        52%
        43.0
        QR013_3_2
        83.2%
        52%
        43.0
        QR013_4_1
        83.5%
        55%
        35.9
        QR013_4_2
        82.7%
        55%
        35.9
        QR014_0_1
        62.6%
        50%
        35.8
        QR014_0_2
        61.2%
        50%
        35.8
        QR014_1_1
        62.0%
        51%
        33.2
        QR014_1_2
        61.1%
        51%
        33.2
        QR014_2_1
        60.9%
        51%
        32.5
        QR014_2_2
        59.8%
        51%
        32.5
        QR014_3_1
        64.6%
        51%
        33.5
        QR014_3_2
        63.3%
        51%
        33.5
        QR014_4_1
        64.2%
        51%
        33.0
        QR014_4_2
        62.7%
        51%
        33.0
        QR017_0_1
        66.8%
        51%
        33.5
        QR017_0_2
        65.7%
        51%
        33.5
        QR017_1_1
        74.4%
        50%
        44.8
        QR017_1_2
        72.9%
        50%
        44.8
        QR017_2_1
        66.3%
        51%
        41.7
        QR017_2_2
        65.6%
        51%
        41.7
        QR017_3_1
        63.7%
        52%
        36.6
        QR017_3_2
        62.0%
        52%
        36.6
        QR017_4_1
        62.9%
        52%
        31.9
        QR017_4_2
        61.2%
        52%
        31.9
        QR020_0_1
        61.6%
        51%
        40.7
        QR020_0_2
        47.2%
        51%
        40.7
        QR020_1_1
        72.2%
        52%
        49.4
        QR020_1_2
        70.9%
        52%
        49.4
        QR020_2_1
        73.6%
        54%
        50.1
        QR020_2_2
        72.4%
        53%
        50.1
        QR020_3_1
        64.5%
        51%
        36.6
        QR020_3_2
        63.5%
        51%
        36.6
        QR020_4_1
        63.0%
        51%
        44.6
        QR020_4_2
        61.3%
        51%
        44.6
        QR021_0_1
        65.4%
        50%
        40.6
        QR021_0_2
        64.4%
        50%
        40.6
        QR021_1_1
        64.5%
        51%
        35.0
        QR021_1_2
        63.2%
        50%
        35.0
        QR021_2_1
        68.0%
        52%
        50.3
        QR021_2_2
        55.3%
        52%
        50.3
        QR021_3_1
        66.4%
        52%
        43.5
        QR021_3_2
        51.7%
        52%
        43.5
        QR021_4_1
        65.9%
        52%
        37.2
        QR021_4_2
        53.8%
        52%
        37.2
        QR022_0_1
        77.1%
        52%
        37.4
        QR022_0_2
        72.1%
        52%
        37.4
        QR022_1_1
        62.5%
        50%
        33.4
        QR022_1_2
        61.6%
        50%
        33.4
        QR022_2_1
        69.3%
        52%
        60.4
        QR022_2_2
        68.0%
        52%
        60.4
        QR022_3_1
        70.4%
        52%
        53.2
        QR022_3_2
        69.2%
        52%
        53.2
        QR022_4_1
        71.5%
        53%
        51.7
        QR022_4_2
        70.0%
        52%
        51.7
        QR023_0_1
        63.1%
        51%
        49.8
        QR023_0_2
        61.3%
        51%
        49.8
        QR023_1_1
        63.5%
        50%
        34.7
        QR023_1_2
        62.5%
        50%
        34.7
        QR023_2_1
        80.1%
        50%
        43.5
        QR023_2_2
        79.0%
        50%
        43.5
        QR023_3_1
        61.8%
        51%
        30.2
        QR023_3_2
        61.3%
        51%
        30.2
        QR023_4_1
        61.1%
        52%
        31.7
        QR023_4_2
        59.9%
        51%
        31.7
        QR024_0_1
        55.0%
        50%
        30.5
        QR024_0_2
        53.4%
        50%
        30.5
        QR024_1_1
        62.5%
        52%
        33.7
        QR024_1_2
        61.1%
        52%
        33.7
        QR024_2_1
        65.1%
        51%
        43.9
        QR024_2_2
        63.7%
        51%
        43.9
        QR024_3_1
        59.4%
        52%
        31.8
        QR024_3_2
        58.9%
        51%
        31.8
        QR024_4_1
        72.4%
        52%
        48.0
        QR024_4_2
        71.2%
        52%
        48.0
        QR025_0_1
        69.2%
        50%
        38.1
        QR025_0_2
        66.7%
        50%
        38.1
        QR025_1_1
        64.6%
        51%
        39.2
        QR025_1_2
        64.3%
        51%
        39.2
        QR025_2_1
        59.7%
        51%
        40.5
        QR025_2_2
        57.9%
        51%
        40.5
        QR025_3_1
        69.5%
        52%
        49.2
        QR025_3_2
        68.2%
        52%
        49.2
        QR025_4_1
        64.3%
        51%
        48.6
        QR025_4_2
        62.0%
        51%
        48.6
        QR026_0_1
        62.8%
        50%
        31.3
        QR026_0_2
        59.7%
        49%
        31.3
        QR026_1_1
        63.8%
        50%
        36.5
        QR026_1_2
        61.4%
        50%
        36.5
        QR026_2_1
        64.6%
        51%
        52.6
        QR026_2_2
        63.9%
        51%
        52.6
        QR026_3_1
        69.6%
        53%
        43.7
        QR026_3_2
        69.0%
        53%
        43.7
        QR026_4_1
        68.8%
        51%
        49.9
        QR026_4_2
        67.7%
        51%
        49.9
        QR028_0_1
        67.0%
        52%
        44.4
        QR028_0_2
        66.5%
        52%
        44.4
        QR028_1_1
        61.7%
        52%
        41.2
        QR028_1_2
        60.8%
        51%
        41.2
        QR028_2_1
        65.0%
        52%
        44.7
        QR028_2_2
        64.0%
        52%
        44.7
        QR028_3_1
        65.6%
        51%
        32.9
        QR028_3_2
        63.6%
        50%
        32.9
        QR028_4_1
        69.9%
        52%
        53.9
        QR028_4_2
        69.3%
        52%
        53.9
        QR060_0_1
        67.1%
        52%
        40.5
        QR060_0_2
        65.7%
        52%
        40.5
        QR060_1_1
        73.0%
        49%
        49.5
        QR060_1_2
        71.6%
        49%
        49.5
        QR060_2_1
        69.0%
        53%
        43.8
        QR060_2_2
        67.8%
        53%
        43.8
        QR060_3_1
        69.6%
        52%
        43.9
        QR060_3_2
        68.7%
        52%
        43.9
        QR060_4_1
        62.7%
        51%
        41.9
        QR060_4_2
        61.6%
        51%
        41.9
        QR061_0_1
        63.5%
        52%
        36.8
        QR061_0_2
        62.9%
        52%
        36.8
        QR061_1_1
        60.6%
        52%
        38.6
        QR061_1_2
        59.2%
        51%
        38.6
        QR061_2_1
        61.2%
        51%
        39.9
        QR061_2_2
        59.8%
        51%
        39.9
        QR061_3_1
        65.8%
        50%
        32.2
        QR061_3_2
        63.8%
        50%
        32.2
        QR061_4_1
        68.1%
        52%
        33.7
        QR061_4_2
        67.1%
        52%
        33.7
        QR062_0_1
        67.8%
        52%
        47.6
        QR062_0_2
        66.7%
        52%
        47.6
        QR062_1_1
        65.3%
        50%
        40.9
        QR062_1_2
        63.4%
        50%
        40.9
        QR062_2_1
        88.0%
        49%
        43.4
        QR062_2_2
        86.3%
        49%
        43.4
        QR062_3_1
        67.9%
        50%
        40.7
        QR062_3_2
        66.2%
        50%
        40.7
        QR062_4_1
        67.9%
        51%
        40.7
        QR062_4_2
        66.4%
        51%
        40.7
        QR064_0_1
        59.1%
        51%
        50.3
        QR064_0_2
        58.2%
        51%
        50.3
        QR064_1_1
        74.6%
        52%
        48.7
        QR064_1_2
        73.0%
        52%
        48.7
        QR064_2_1
        58.2%
        51%
        37.7
        QR064_2_2
        56.4%
        51%
        37.7
        QR064_3_1
        77.3%
        53%
        41.3
        QR064_3_2
        75.2%
        53%
        41.3
        QR064_4_1
        62.5%
        51%
        42.6
        QR064_4_2
        60.5%
        51%
        42.6
        QR065_0_1
        60.8%
        51%
        31.6
        QR065_0_2
        59.9%
        51%
        31.6
        QR065_1_1
        64.4%
        51%
        39.5
        QR065_1_2
        62.6%
        51%
        39.5
        QR065_2_1
        60.5%
        51%
        33.4
        QR065_2_2
        59.7%
        51%
        33.4
        QR065_3_1
        68.8%
        50%
        36.7
        QR065_3_2
        67.7%
        50%
        36.7
        QR065_4_1
        68.6%
        50%
        35.3
        QR065_4_2
        67.9%
        50%
        35.3
        QR066_0_1
        64.1%
        51%
        33.0
        QR066_0_2
        62.5%
        51%
        33.0
        QR067_0_1
        66.0%
        50%
        48.9
        QR067_0_2
        64.7%
        50%
        48.9
        QR077_0_1
        68.2%
        50%
        43.6
        QR077_0_2
        65.3%
        50%
        43.6
        QR077_1_1
        65.9%
        50%
        44.8
        QR077_1_2
        64.1%
        50%
        44.8
        QR077_2_1
        62.9%
        50%
        40.7
        QR077_2_2
        60.4%
        50%
        40.7
        QR077_3_1
        62.3%
        52%
        34.7
        QR077_3_2
        62.0%
        52%
        34.7
        QR077_4_1
        66.0%
        51%
        44.6
        QR077_4_2
        65.2%
        51%
        44.6
        QR080_0_1
        70.4%
        50%
        37.6
        QR080_0_2
        69.0%
        50%
        37.6
        QR080_1_1
        70.3%
        50%
        32.0
        QR080_1_2
        68.3%
        50%
        32.0
        QR080_2_1
        63.7%
        52%
        41.7
        QR080_2_2
        63.1%
        52%
        41.7
        QR080_3_1
        66.3%
        52%
        32.0
        QR080_3_2
        65.4%
        52%
        32.0
        QR080_4_1
        71.4%
        51%
        55.2
        QR080_4_2
        69.7%
        51%
        55.2
        QR093_0_1
        64.6%
        53%
        46.9
        QR093_0_2
        63.5%
        52%
        46.9
        QR093_1_1
        80.2%
        52%
        49.2
        QR093_1_2
        78.4%
        52%
        49.2
        QR093_2_1
        77.9%
        53%
        49.6
        QR093_2_2
        75.7%
        53%
        49.6
        QR093_3_1
        63.9%
        52%
        39.9
        QR093_3_2
        62.9%
        52%
        39.9
        QR093_4_1
        64.7%
        52%
        44.0
        QR093_4_2
        64.2%
        52%
        44.0
        QR094_0_1
        58.9%
        51%
        34.6
        QR094_0_2
        58.4%
        51%
        34.6
        QR094_1_1
        59.5%
        52%
        28.0
        QR094_1_2
        58.3%
        52%
        28.0
        QR094_2_1
        64.1%
        51%
        39.6
        QR094_2_2
        62.0%
        51%
        39.6
        QR094_3_1
        66.3%
        52%
        53.4
        QR094_3_2
        65.2%
        52%
        53.4
        QR094_4_1
        65.5%
        51%
        41.4
        QR094_4_2
        64.8%
        51%
        41.4
        QR095_0_1
        63.4%
        52%
        45.9
        QR095_0_2
        62.6%
        52%
        45.9
        QR095_1_1
        62.3%
        50%
        32.8
        QR095_1_2
        61.5%
        50%
        32.8
        QR095_2_1
        64.0%
        51%
        40.9
        QR095_2_2
        62.4%
        51%
        40.9
        QR095_3_1
        67.0%
        52%
        42.9
        QR095_3_2
        66.1%
        52%
        42.9
        QR095_4_1
        66.9%
        52%
        44.7
        QR095_4_2
        65.7%
        51%
        44.7
        QR096_0_1
        60.0%
        51%
        47.0
        QR096_0_2
        59.0%
        51%
        47.0
        QR096_1_1
        67.1%
        50%
        48.1
        QR096_1_2
        64.7%
        50%
        48.1
        QR096_2_1
        63.4%
        50%
        41.0
        QR096_2_2
        60.3%
        50%
        41.0
        QR096_3_1
        67.1%
        52%
        43.5
        QR096_3_2
        66.2%
        52%
        43.5
        QR096_4_1
        67.7%
        52%
        44.2
        QR096_4_2
        66.5%
        52%
        44.2
        QR097_0_1
        58.4%
        49%
        37.3
        QR097_0_2
        56.9%
        49%
        37.3
        QR097_1_1
        60.8%
        50%
        39.6
        QR097_1_2
        58.5%
        50%
        39.6
        QR097_2_1
        61.2%
        51%
        43.9
        QR097_2_2
        60.6%
        51%
        43.9
        QR097_3_1
        72.8%
        50%
        38.0
        QR097_3_2
        70.1%
        50%
        38.0
        QR097_4_1
        66.9%
        51%
        40.9
        QR097_4_2
        64.5%
        51%
        40.9
        QR098_0_1
        56.3%
        51%
        33.4
        QR098_0_2
        54.9%
        51%
        33.4
        QR098_1_1
        62.0%
        52%
        41.9
        QR098_1_2
        61.4%
        52%
        41.9
        QR098_2_1
        72.0%
        52%
        36.1
        QR098_2_2
        69.7%
        52%
        36.1
        QR098_3_1
        62.5%
        51%
        43.1
        QR098_3_2
        61.7%
        51%
        43.1
        QR098_4_1
        76.0%
        53%
        35.4
        QR098_4_2
        73.3%
        53%
        35.4
        QR099_0_1
        67.1%
        52%
        46.0
        QR099_0_2
        66.1%
        52%
        46.0
        QR099_1_1
        59.6%
        51%
        35.6
        QR099_1_2
        58.0%
        51%
        35.6
        QR099_2_1
        58.5%
        51%
        31.5
        QR099_2_2
        56.5%
        51%
        31.5
        QR099_3_1
        64.6%
        51%
        38.3
        QR099_3_2
        62.6%
        50%
        38.3
        QR099_4_1
        63.0%
        50%
        33.1
        QR099_4_2
        61.4%
        50%
        33.1
        QR100_0_1
        61.0%
        52%
        36.8
        QR100_0_2
        60.4%
        52%
        36.8
        QR100_1_1
        60.0%
        51%
        38.2
        QR100_1_2
        59.0%
        51%
        38.2
        QR100_2_1
        58.0%
        51%
        31.9
        QR100_2_2
        57.0%
        51%
        31.9
        QR100_3_1
        60.1%
        51%
        36.0
        QR100_3_2
        59.4%
        51%
        36.0
        QR100_4_1
        63.9%
        50%
        45.5
        QR100_4_2
        61.8%
        50%
        45.5
        QR102_0_1
        65.6%
        52%
        54.8
        QR102_0_2
        64.7%
        52%
        54.8
        QR102_1_1
        60.9%
        51%
        44.3
        QR102_1_2
        59.8%
        51%
        44.3
        QR102_2_1
        58.3%
        51%
        31.1
        QR102_2_2
        57.9%
        51%
        31.1
        QR102_3_1
        66.3%
        52%
        53.6
        QR102_3_2
        65.4%
        52%
        53.6
        QR102_4_1
        64.0%
        50%
        36.4
        QR102_4_2
        61.4%
        50%
        36.4
        QR103_0_1
        60.5%
        51%
        42.8
        QR103_0_2
        59.7%
        51%
        42.8
        QR103_1_1
        62.8%
        50%
        38.0
        QR103_1_2
        60.9%
        50%
        38.0
        QR103_2_1
        62.0%
        50%
        33.3
        QR103_2_2
        60.0%
        50%
        33.3
        QR103_3_1
        61.7%
        52%
        40.1
        QR103_3_2
        61.1%
        52%
        40.1
        QR103_4_1
        66.5%
        51%
        54.3
        QR103_4_2
        65.5%
        51%
        54.3
        QR104_0_1
        61.6%
        52%
        45.8
        QR104_0_2
        60.5%
        52%
        45.8
        QR104_1_1
        60.4%
        50%
        31.3
        QR104_1_2
        59.2%
        50%
        31.3
        QR104_2_1
        62.8%
        52%
        40.0
        QR104_2_2
        61.3%
        52%
        40.0
        QR104_3_1
        62.4%
        52%
        34.1
        QR104_3_2
        61.4%
        52%
        34.1
        QR104_4_1
        63.3%
        52%
        34.6
        QR104_4_2
        62.3%
        52%
        34.6
        QR105_0_1
        63.4%
        52%
        38.1
        QR105_0_2
        62.2%
        52%
        38.1
        QR105_1_1
        63.7%
        52%
        38.0
        QR105_1_2
        62.2%
        52%
        38.0
        QR105_2_1
        60.2%
        51%
        36.1
        QR105_2_2
        59.2%
        51%
        36.1
        QR105_3_1
        66.3%
        52%
        33.6
        QR105_3_2
        64.9%
        52%
        33.6
        QR105_4_1
        65.2%
        52%
        42.1
        QR105_4_2
        64.3%
        52%
        42.1
        QR106_0_1
        64.5%
        51%
        43.6
        QR106_0_2
        63.7%
        51%
        43.6
        QR106_1_1
        61.0%
        52%
        34.1
        QR106_1_2
        59.7%
        52%
        34.1
        QR106_2_1
        61.1%
        52%
        36.4
        QR106_2_2
        60.2%
        52%
        36.4
        QR106_3_1
        62.6%
        52%
        32.9
        QR106_3_2
        61.2%
        52%
        32.9
        QR106_4_1
        61.6%
        52%
        33.2
        QR106_4_2
        60.4%
        52%
        33.2
        QR107_0_1
        61.5%
        51%
        45.5
        QR107_0_2
        60.8%
        51%
        45.5
        QR107_1_1
        61.4%
        53%
        36.6
        QR107_1_2
        60.5%
        53%
        36.6
        QR107_2_1
        65.5%
        52%
        35.6
        QR107_2_2
        64.3%
        52%
        35.6
        QR107_3_1
        65.1%
        52%
        39.1
        QR107_3_2
        64.0%
        52%
        39.1
        QR107_4_1
        63.8%
        52%
        35.2
        QR107_4_2
        63.0%
        52%
        35.2
        QR108_0_1
        66.9%
        52%
        48.9
        QR108_0_2
        65.0%
        52%
        48.9
        QR108_1_1
        63.5%
        52%
        47.1
        QR108_1_2
        61.1%
        52%
        47.1
        QR108_2_1
        67.8%
        52%
        49.9
        QR108_2_2
        65.4%
        52%
        49.9
        QR108_3_1
        65.5%
        52%
        44.4
        QR108_3_2
        62.8%
        52%
        44.4
        QR108_4_1
        66.5%
        52%
        43.8
        QR108_4_2
        64.6%
        52%
        43.8

        FastQC

        FastQC is a quality control tool for high throughput sequence data, written by Simon Andrews at the Babraham Institute in Cambridge.

        Sequence Quality Histograms

        The mean quality value across each base position in the read. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Sequence Quality Scores

        The number of reads with average quality scores. Shows if a subset of reads has poor quality. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Base Sequence Content

        The proportion of each base position for which each of the four normal DNA bases has been called. See the FastQC help.

        Click a sample row to see a line plot for that dataset.
        Rollover for sample name
        Position: -
        %T: -
        %C: -
        %A: -
        %G: -

        Per Sequence GC Content

        The average GC content of reads. Normal random library typically have a roughly normal distribution of GC content. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Base N Content

        The percentage of base calls at each position for which an N was called. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Sequence Length Distribution

        All samples have sequences of a single length (150bp).

        Sequence Duplication Levels

        The relative level of duplication found for every sequence. See the FastQC help.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Overrepresented sequences

        The total amount of overrepresented sequences found in each library. See the FastQC help for further information.

        376 samples had less than 1% of reads made up of overrepresented sequences

        Adapter Content

        The cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position. See the FastQC help. Only samples with ≥ 0.1% adapter contamination are shown.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).